Wednesday, June 27, 2007

XMedCon

Nolf E, "XMedCon - An open-source medical image conversion toolkit";
European Journal of Nuclear Medicine; Vol. 30 (suppl. 2); 2003; pp S246; TP39.

The supported formats are:

Acr/Nema 2.0, Analyze (SPM), Concorde/µPET, DICOM 3.0, CTI ECAT 6/7, NIfTI-1, InterFile3.3 and PNG or Gif87a/89a.

In addition, the program allows to read unsupported files without compression, to print pixel values or to extract/reorder/reslice study images. It is possible to export images as PNG or annimated GIF for desktop applications. Its library can be used as a framework.

完整的官方说明:http://xmedcon.sourceforge.net/Main/Documentation




一个论坛

http://brainmapping.ttsite.com/index.php

心心水滴的神圣殿堂:认知与脑成像研究


XMedCon

Xmedcon - Medical image conversion utility and library


XMedCon是一个医学图像转换工具和库

The Medical Image Conversion library consists of a library, a command line utility, and a GUI interface for converting and manipulating medical images. It can convert between commonly used formats in (freely available) research tools, while preserving medical parameters like patient information, slice orientation, voxel dimension and pixel quantitation. The program can also read unsupported files without compression, print pixel values, or extract/reorder specified images. The library can also be used as a framework for your own image format.

Web pagehttp://xmedcon.sourceforge.net/

Wednesday, June 20, 2007

在mac上安装amide

Mac OS X server 10.4.9 (PowerPC G5 Server)

按照amide的安装说明:

1. Downloaded Fink http://prdownloads.sourceforge.net/fink/Fink-0.8.1-PowerPC-Installer.dmg?download
2. Installed Fink by running the installer.
3. sudo pico /sw/etc/apt/sources.list Add the following lines to the end of the file:

# AMIDE
deb file:/sw/fink amide-10.3 main
deb http://www.stanford.edu/~loening/fink 10.3/current main

4. sudo pico /sw/etc/fink.conf To the Trees line add "amide-10.4/main", so the line reads as follows:
Trees: local/main stable/main stable/crypto amide-10.3/main 
5. Run "fink scanpackages".
6. Get new package information with "sudo apt-get update".
7. Install everything with "sudo apt-get install amide".
8. Now, start X11.app, go to the menu entry "Applications->Customize", and for the terminal entry, change the command from "xterm" to "xterm -ls". Also, edit the file /etc/X11/xinit/xinitrc (you can use "sudo pico /etc/X11/xinit/xinitrc" from the command prompt) and change the line that says "xterm &" to "xterm -ls &".
9. Restart the console/xterm, and run "amide". Note, the first time you run AMIDE, loading may take a long time as the pango library generates some font caching information. Subsequent loads will be much faster.

安装成功。